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You were right!
The problem was that it still tried to filter the results by “phantom” categories and that's different for every site. Now that I have modified that code part it should show exatly the same results for each site.
This was also the problem with the local search, so I was lucky to fix both issues. I have tried several phrases to test it, and it was succesful.
Please note that the default wordpress search results (when clicking the magnifier) may and will differ in some cases, because Ajax Search pro plugin cannot affect those results. (it probably will in the future) They should be similar though.Best,
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